Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
utils Directory Reference

Files

file  adv_edge_iters.hpp [code]
 
file  alternating_path.hpp [code]
 
file  ambigous_paths.hpp [code]
 
file  branching_vector.hpp [code]
 
file  command_line.hpp [code]
 
file  convert.hpp [code]
 
file  exceptions.hpp [code]
 
file  filters.hpp [code]
 
file  graph_infos.hpp [code]
 
file  graph_parameters.hpp [code]
 
file  graph_typedefs.hpp [code]
 
file  graph_utils.hpp [code]
 
file  instance.hpp [code]
 
file  low_priority_queue.hpp [code]
 
file  min_matrix.hpp [code]
 
file  normal_distribution.hpp [code]
 
file  permissive_matching.hpp [code]
 
file  predicates.hpp [code]
 
file  profiling.hpp [code]
 
file  scaffold_graph.hpp [code]
 
file  scaffolding_typedefs.hpp [code]
 
file  scaffolding_utils.hpp [code]
 
file  scoring.hpp [code]
 
file  set_queue.hpp [code]
 
file  solution.hpp [code]
 
file  string_utils.hpp [code]
 
file  td_subgraph.hpp [code]
 
file  unordered_pair.hpp [code]
 
file  utils.hpp [code]