Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
Classes
solution.hpp File Reference
#include <list>
#include "utils/graph_typedefs.hpp"

Go to the source code of this file.

Classes

class  scaffold::Solution< Compare >
 a solution is a list of edge names with weights; it keeps track of the overall weight for O(1) access More...
 

Detailed Description

defines a solution class, storing edge names and their weight