Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
Public Member Functions | Public Attributes | List of all members
scaffold::OrientedSequence Struct Reference
Inheritance diagram for scaffold::OrientedSequence:
scaffold::UseCountedOrientedSequence

Public Member Functions

 OrientedSequence (const OrientedSequence &os)
 
 OrientedSequence (const std::string &_sequence, const std::string &_start=VertexName())
 
void reverse_complement (const VertexName &new_start_vertex=VertexName())
 

Public Attributes

std::string sequence
 
VertexName start_vertex
 

The documentation for this struct was generated from the following file: