Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
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#include "utils/predicates.hpp"
#include "utils/graph_typedefs.hpp"
#include "utils/scaffolding_typedefs.hpp"
#include "utils/graph_infos.hpp"
#include "utils/alternating_path.hpp"
Go to the source code of this file.
Classes | |
class | scaffold::ScaffoldGraph |
the main graph class More... | |
implementation of the main graph class, managing everything related to the underlying graph and its matching