Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
Public Member Functions | Public Attributes | List of all members
scaffold::UseCountedOrientedSequence Struct Reference
Inheritance diagram for scaffold::UseCountedOrientedSequence:
scaffold::OrientedSequence

Public Member Functions

 UseCountedOrientedSequence (const OrientedSequence &os)
 
- Public Member Functions inherited from scaffold::OrientedSequence
 OrientedSequence (const OrientedSequence &os)
 
 OrientedSequence (const std::string &_sequence, const std::string &_start=VertexName())
 
void reverse_complement (const VertexName &new_start_vertex=VertexName())
 

Public Attributes

unsigned counter = 1
 
- Public Attributes inherited from scaffold::OrientedSequence
std::string sequence
 
VertexName start_vertex
 

The documentation for this struct was generated from the following file: