Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
scaffold::solv::P_to_pc_map Member List

This is the complete list of members for scaffold::solv::P_to_pc_map, including all inherited members.

apply_permutation(const BytePermutation &perm) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
destructive_merge(P_to_pc_map &m) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
forget_vertex(const byte v_idx) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
intro_edge(const byte u_idx, const byte v_idx, const byte du, const byte dv, const EdgeName &en, const size_t weight) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
join(const P_to_pc_map &T, const DegMap &new_deg2) const (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
make_copy(P_to_pc_map &target) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
merge(const PermissiveMatching &P, pc_to_sol *const pc) (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapinline
operator<< (defined in scaffold::solv::P_to_pc_map)scaffold::solv::P_to_pc_mapfriend