Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
scaffold::solv::DP::d_to_P_map Member List

This is the complete list of members for scaffold::solv::DP::d_to_P_map, including all inherited members.

apply_permutation(const BytePermutation &perm) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
forget_vertex(const byte v_idx) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
intro_edge(byte u_idx, byte v_idx, const bool mu, const bool mv, const bool mu_old, const bool mv_old, const bool is_matching_edge, const EdgeName &en, const size_t weight) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
join(const d_to_P_map &T, const DegMap &old_M, const DegMap &T_M) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
make_copy(d_to_P_map &target) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
merge(const DegMap &d, P_to_pc_map *const Ppc) (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapinline
operator<< (defined in scaffold::solv::DP::d_to_P_map)scaffold::solv::DP::d_to_P_mapfriend