Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
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Public Member Functions | |
UseCountedOrientedSequence (const OrientedSequence &os) | |
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OrientedSequence (const OrientedSequence &os) | |
OrientedSequence (const std::string &_sequence, const std::string &_start=VertexName()) | |
void | reverse_complement (const VertexName &new_start_vertex=VertexName()) |
Public Attributes | |
unsigned | counter = 1 |
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std::string | sequence |
VertexName | start_vertex |