Scaffolding  0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
scaffold::gviz_edge_writer_with_jumps Member List

This is the complete list of members for scaffold::gviz_edge_writer_with_jumps, including all inherited members.

g (defined in scaffold::gviz_property_writer< ScafEdge >)scaffold::gviz_property_writer< ScafEdge >
gviz_edge_writer_with_jumps(const RawScaffoldGraph &_g, const std::list< contig_jump > &_jumps) (defined in scaffold::gviz_edge_writer_with_jumps)scaffold::gviz_edge_writer_with_jumpsinline
gviz_property_writer(const RawScaffoldGraph &_g) (defined in scaffold::gviz_property_writer< ScafEdge >)scaffold::gviz_property_writer< ScafEdge >inline
jump_edges (defined in scaffold::gviz_edge_writer_with_jumps)scaffold::gviz_edge_writer_with_jumps
operator()(std::ostream &out, const ScafEdge &e) const (defined in scaffold::gviz_edge_writer_with_jumps)scaffold::gviz_edge_writer_with_jumpsinline
write_properties(std::ostream &out, const ScafEdge &e) const (defined in scaffold::gviz_edge_writer_with_jumps)scaffold::gviz_edge_writer_with_jumpsinline
write_property(std::ostream &out, const std::string &name, const std::string &value, const std::string &middle="") const (defined in scaffold::gviz_property_writer< ScafEdge >)scaffold::gviz_property_writer< ScafEdge >inline
write_property(std::ostream &out, const std::string &name, const unsigned &value, const std::string &middle="") const (defined in scaffold::gviz_property_writer< ScafEdge >)scaffold::gviz_property_writer< ScafEdge >inline